Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HTR3EA5X5Y0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.21■□□□□ 0.5
HTR3EA5X5Y0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HTR3EA5X5Y0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 AC116562.4-201ENST00000641316 2276 ntBASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HTR3EA5X5Y0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AP000997.3-201ENST00000623333 2250 ntBASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AC016769.1-201ENST00000409132 1010 ntBASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AC087623.3-201ENST00000607047 1098 ntBASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 AL049812.1-201ENST00000432563 2267 ntBASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HTR3EA5X5Y0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 KRT18P5-201ENST00000436075 1291 ntBASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MFSD11-216ENST00000590393 1141 ntBASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HTR3EA5X5Y0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.17■□□□□ 0.5
HTR3EA5X5Y0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.17■□□□□ 0.5
HTR3EA5X5Y0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms