Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 TSPY6P-201ENST00000448518 926 ntBASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC091874.3-201ENST00000512672 1195 ntBASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC116351.2-201ENST00000606540 1585 ntBASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRBV6-4A0A1B0GX49 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV6-4A0A1B0GX49 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC097658.1-201ENST00000475555 843 ntBASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 AC018553.1-201ENST00000616682 1458 ntBASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV6-4A0A1B0GX49 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.9□□□□□ -0.19
TRBV6-4A0A1B0GX49 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.9□□□□□ -0.19
TRBV6-4A0A1B0GX49 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV6-4A0A1B0GX49 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms