Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV25A0A0B4J276 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 TMEM179-206ENST00000616017 1645 ntBASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 KRT16P5-201ENST00000455284 522 ntBASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 AP006294.2-201ENST00000641667 209 ntBASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 AC099778.1-201ENST00000568593 1911 ntBASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV25A0A0B4J276 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 AL158047.1-201ENST00000445918 881 ntBASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 AC092667.1-201ENST00000434301 2586 ntBASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms