Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC004911.1-201ENST00000416316 871 ntBASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MFSD11-216ENST00000590393 1141 ntBASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV8-3A0A0A6YYJ7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC026471.1-201ENST00000564629 3026 ntBASIC13.96□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC007322.1-201ENST00000426983 750 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC007322.4-201ENST00000509611 723 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AL162412.1-201ENST00000567129 965 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AL591742.1-201ENST00000604433 565 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC080038.1-201ENST00000611274 1154 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IKBKGP1-201ENST00000612193 1073 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC011484.1-201ENST00000377652 1995 ntBASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC008694.1-202ENST00000636953 945 ntBASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms