Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 AC073210.2-201ENST00000430369 194 ntBASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 AC091874.3-201ENST00000512672 1195 ntBASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV26-1A0A087WT03 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV26-1A0A087WT03 AC005332.8-201ENST00000622750 2735 ntBASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 C2orf69P4-201ENST00000565394 541 ntBASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV26-1A0A087WT03 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV26-1A0A087WT03 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV26-1A0A087WT03 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV26-1A0A087WT03 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV26-1A0A087WT03 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV26-1A0A087WT03 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 AC092720.2-201ENST00000602388 1665 ntBASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV26-1A0A087WT03 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms