Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 AL512625.2-201ENST00000417533 625 ntBASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 AC023632.3-201ENST00000521633 145 ntBASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 RARRES2P6-201ENST00000567333 442 ntBASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 MIR5787-201ENST00000611784 55 ntBASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV30A0A087WSZ9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 AC026271.2-201ENST00000428091 497 ntBASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV30A0A087WSZ9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV30A0A087WSZ9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 AC125437.2-201ENST00000625180 2167 ntBASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 AC010980.2-201ENST00000587099 1412 ntBASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV30A0A087WSZ9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms