Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC090616.2-202ENST00000584248 222 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC073387.2-201ENST00000604797 784 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC092681.3-201ENST00000609463 678 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 PART1_2.1-201ENST00000612397 250 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC007014.2-201ENST00000615581 479 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AL162377.2-201ENST00000624532 337 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC099654.12-201ENST00000639868 649 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC092646.2-201ENST00000431242 2095 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 SAMMSON-203ENST00000641005 2168 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 BX322650.1-201ENST00000332359 2143 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 HYDIN2-203ENST00000614586 13885 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SKP174-201ENST00000363803 330 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AL358178.1-201ENST00000407698 397 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC009413.1-201ENST00000414823 399 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AL513175.2-201ENST00000422071 443 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 PUDPP2-201ENST00000431423 643 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 CHCHD4P5-201ENST00000436684 427 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 RPL5P32-201ENST00000454085 879 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC009153.1-201ENST00000485799 496 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC055764.2-201ENST00000610089 670 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 AC233280.20-201ENST00000637412 416 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 BX005019.1-201ENST00000561881 1810 ntBASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PDZRN3Q9UPQ7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SKP28-201ENST00000364770 305 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 Y_RNA.326-201ENST00000365176 113 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ATP5F1P4-201ENST00000397288 746 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 ARSFP1-201ENST00000398758 477 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SKP58-201ENST00000411010 305 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 Z83313.1-201ENST00000433780 718 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 LARP1BP3-201ENST00000437229 869 ntBASIC9.29□□□□□ -0.92
PDZRN3Q9UPQ7 SS18L2P1-201ENST00000445923 213 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms