Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 P2RY10P2-201ENST00000416730 913 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC008033.2-201ENST00000542626 177 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC068538.1-201ENST00000376856 336 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC068522.1-201ENST00000482895 345 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 MIR5095-201ENST00000578844 88 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 AC009704.2-201ENST00000618739 483 ntBASIC5.88□□□□□ -1.47
CHD7Q9P2D1 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHD7Q9P2D1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 RN7SKP126-201ENST00000411143 300 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC092647.2-201ENST00000452998 253 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC073581.1-201ENST00000519036 575 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 C1GALT1P3-201ENST00000522049 819 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC139697.1-201ENST00000548429 745 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AL034546.1-201ENST00000623740 3693 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC096775.1-201ENST00000437724 448 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 DUTP1-201ENST00000493631 470 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 TPM3P3-201ENST00000521343 354 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 PCNPP1-201ENST00000552501 511 ntBASIC5.87□□□□□ -1.47
CHD7Q9P2D1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CHD7Q9P2D1 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC005725.1-201ENST00000577346 2607 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC015977.1-201ENST00000418887 292 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 OR5M12P-201ENST00000423388 929 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 OLMALINC-203ENST00000641087 3779 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 AC022164.1-201ENST00000568767 2673 ntBASIC5.86□□□□□ -1.47
CHD7Q9P2D1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CHD7Q9P2D1 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms