Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AL034417.4-202ENST00000642135 2236 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AL591848.4-201ENST00000567832 3472 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 RNA5SP387-201ENST00000364226 106 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AL050305.1-201ENST00000399993 1230 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 COX6B1P1-201ENST00000415962 213 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 RPS15AP30-201ENST00000420976 390 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 OR11I1P-201ENST00000486033 954 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 RPL26P30-202ENST00000602923 645 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC018816.2-201ENST00000621460 353 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RNU6-525P-201ENST00000363685 104 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RNA5SP479-201ENST00000364858 117 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL133173.1-201ENST00000423458 397 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CUBNP2-201ENST00000443534 1139 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 OR5AN2P-201ENST00000534535 896 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC091193.1-201ENST00000604640 448 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 MFSD8-220ENST00000641243 1422 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC020658.2-201ENST00000559030 4020 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC016583.1-201ENST00000624221 2431 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RN7SKP145-201ENST00000363291 303 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL353625.1-202ENST00000366273 571 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RBM22P1-201ENST00000578589 1214 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 AC068724.3-201ENST00000625906 87 ntBASIC5.49□□□□□ -1.53
CHD8Q9HCK8 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CHD8Q9HCK8 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.48□□□□□ -1.53
CHD8Q9HCK8 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms