Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL499605.1-201ENST00000604628 403 ntBASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTPN20Q4JDL3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 MFSD8-219ENST00000641228 2559 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RNU1-150P-201ENST00000362491 162 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RNA5SP433-201ENST00000364491 114 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RN7SKP275-201ENST00000364626 301 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RN7SKP78-201ENST00000364711 318 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 RPL24P2-201ENST00000421023 475 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AC096775.1-201ENST00000437724 448 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 SUMO2P19-201ENST00000518920 295 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 IGLV3-30-201ENST00000524362 298 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AL139099.4-201ENST00000614802 114 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 MIR6071-201ENST00000616741 78 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 AC025262.3-201ENST00000623666 360 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.18□□□□□ -1.42
PTPN20Q4JDL3 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ZNF402P-201ENST00000404435 3100 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 CCAT2-201ENST00000630920 1752 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 RPL34P27-201ENST00000428810 349 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 RPL12P16-201ENST00000431098 498 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AL451063.1-201ENST00000450164 1133 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 RSU1P1-201ENST00000453416 441 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 FRG2FP-204ENST00000453982 852 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC006539.1-201ENST00000481419 501 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 WBP1LP3-201ENST00000523033 208 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AL356801.1-201ENST00000559320 294 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 MFSD8-239ENST00000641590 2479 ntBASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms