Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL137141.1-201ENST00000624622 4836 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 CAP1P2-201ENST00000417455 1409 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN1BQ07699 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN1BQ07699 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN1BQ07699 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN1BQ07699 RNA5SP382-201ENST00000363355 112 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC104297.1-201ENST00000393779 870 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 PEX12P1-201ENST00000400284 1048 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 MRPL32P1-201ENST00000406301 247 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 RPS27AP6-201ENST00000427962 448 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC013403.1-201ENST00000436954 263 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 GAPDHP33-201ENST00000443168 1013 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 SLAMF6P1-201ENST00000451067 602 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC069277.2-201ENST00000454211 432 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 EIF3LP2-201ENST00000457262 807 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC022730.1-201ENST00000473114 568 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 RN7SL70P-201ENST00000478322 302 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 NPM1P28-201ENST00000492269 840 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 SCARNA11.1-201ENST00000516918 132 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AP002004.1-206ENST00000532441 876 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC018552.1-201ENST00000562099 811 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC009120.3-201ENST00000563335 499 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN1BQ07699 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 SNX6P1-201ENST00000601728 1224 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC073111.2-201ENST00000605657 1075 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AL512413.1-201ENST00000606489 382 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC026367.3-201ENST00000619032 590 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC006453.3-201ENST00000635891 377 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 RLIMP2-201ENST00000427891 1563 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 AC009220.2-201ENST00000489759 1751 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 AC114774.1-201ENST00000507410 1770 ntBASIC5.49□□□□□ -1.53
SCN1BQ07699 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SCN1BQ07699 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SCN1BQ07699 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN1BQ07699 PSMC1P6-201ENST00000477233 1319 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 RBPJP2-201ENST00000618187 1444 ntBASIC5.48□□□□□ -1.53
SCN1BQ07699 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN1BQ07699 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms