Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 NPM1P21-201ENST00000513394 762 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 HSD3BP3-201ENST00000514706 994 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 SETP21-201ENST00000514799 892 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 IGHV4-55-201ENST00000520889 368 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 AC130364.2-201ENST00000528639 604 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.74□□□□□ -1.33
PDE6CP51160 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.74□□□□□ -1.33
PDE6CP51160 MIR3189-201ENST00000578735 73 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 RN7SL475P-201ENST00000583379 298 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.74□□□□□ -1.33
PDE6CP51160 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.74□□□□□ -1.33
PDE6CP51160 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 AL021368.3-201ENST00000607119 578 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 AC006924.1-201ENST00000610750 559 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 AL512506.1-201ENST00000613918 449 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.74□□□□□ -1.33
PDE6CP51160 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 AL353763.1-201ENST00000624467 1628 ntBASIC6.74□□□□□ -1.33
PDE6CP51160 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PDE6CP51160 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
PDE6CP51160 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.73□□□□□ -1.33
PDE6CP51160 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC007064.3-201ENST00000422608 359 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC108479.1-201ENST00000431142 427 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 GAPDHP59-201ENST00000435908 267 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 LDHAP2-201ENST00000437325 985 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 DNAJC19P5-201ENST00000443295 316 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 RPS15AP29-201ENST00000445539 400 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.73□□□□□ -1.33
PDE6CP51160 HMGB1P7-201ENST00000450921 612 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 RN7SL643P-201ENST00000471845 291 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 KHDC1P1-201ENST00000511053 508 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 HMGN2P47-201ENST00000559378 272 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.73□□□□□ -1.33
PDE6CP51160 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 AC005332.4-201ENST00000592752 579 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.73□□□□□ -1.33
PDE6CP51160 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.73□□□□□ -1.33
PDE6CP51160 AC006249.1-201ENST00000621223 471 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 AC092692.1-201ENST00000623625 2595 ntBASIC6.73□□□□□ -1.33
PDE6CP51160 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PDE6CP51160 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PDE6CP51160 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDE6CP51160 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.73□□□□□ -1.33
PDE6CP51160 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.73□□□□□ -1.33
PDE6CP51160 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDE6CP51160 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
PDE6CP51160 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PDE6CP51160 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.72□□□□□ -1.33
PDE6CP51160 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
PDE6CP51160 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDE6CP51160 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDE6CP51160 RNA5SP279-201ENST00000365513 117 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 AL360271.1-201ENST00000395679 510 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 AL445238.1-204ENST00000400311 463 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.72□□□□□ -1.33
PDE6CP51160 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.72□□□□□ -1.33
PDE6CP51160 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.72□□□□□ -1.33
PDE6CP51160 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.72□□□□□ -1.33
PDE6CP51160 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.72□□□□□ -1.33
PDE6CP51160 AL645936.1-201ENST00000441979 518 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 AC079922.1-201ENST00000443291 359 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 RPL5P7-201ENST00000444235 813 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 RPL5P10-201ENST00000445207 894 ntBASIC6.72□□□□□ -1.33
PDE6CP51160 RANP2-201ENST00000456833 229 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms