Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL11A1P12107 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.56□□□□□ -1.36
COL11A1P12107 RN7SL352P-201ENST00000466002 277 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 AL355032.1-201ENST00000472981 438 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 AC008410.1-201ENST00000483777 339 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 RN7SL570P-201ENST00000484405 292 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 RPS21P4-201ENST00000487122 248 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.56□□□□□ -1.36
COL11A1P12107 MIR4260-201ENST00000583107 67 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 AL139407.1-201ENST00000613826 1175 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
COL11A1P12107 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL11A1P12107 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL11A1P12107 UG0898H09-202ENST00000623646 7040 ntBASIC6.56□□□□□ -1.36
COL11A1P12107 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.56□□□□□ -1.36
COL11A1P12107 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
COL11A1P12107 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL11A1P12107 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL11A1P12107 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 RN7SKP28-201ENST00000364770 305 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.55□□□□□ -1.36
COL11A1P12107 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.55□□□□□ -1.36
COL11A1P12107 AC245047.2-201ENST00000441060 530 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 RN7SL583P-201ENST00000475692 287 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 AC008953.1-201ENST00000497334 318 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 AC096754.1-201ENST00000508904 818 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.55□□□□□ -1.36
COL11A1P12107 TPM3P3-201ENST00000521343 354 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 AC063977.5-201ENST00000601044 974 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 AC007204.2-201ENST00000615022 616 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL11A1P12107 DOCK11P1-201ENST00000553480 5932 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.55□□□□□ -1.36
COL11A1P12107 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.55□□□□□ -1.36
COL11A1P12107 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL11A1P12107 SNORA16A-201ENST00000384342 137 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL11A1P12107 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.55□□□□□ -1.36
COL11A1P12107 AC021678.3-201ENST00000517893 476 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.55□□□□□ -1.36
COL11A1P12107 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL11A1P12107 AC022819.1-201ENST00000563495 3910 ntBASIC6.55□□□□□ -1.36
COL11A1P12107 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
COL11A1P12107 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 BRD7P6-201ENST00000431406 1860 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 AL662795.2-201ENST00000624252 3706 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 MIR133B-201ENST00000362210 119 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 AC005042.1-201ENST00000393397 800 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 NIFKP3-201ENST00000417799 865 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 RPS4XP1-201ENST00000482189 787 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.54□□□□□ -1.36
COL11A1P12107 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.54□□□□□ -1.36
COL11A1P12107 AC114876.1-201ENST00000490962 1366 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL11A1P12107 MFSD8-239ENST00000641590 2479 ntBASIC6.54□□□□□ -1.36
COL11A1P12107 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
COL11A1P12107 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms