Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 IGLV3-30-201ENST00000524362 298 ntBASIC6.63□□□□□ -1.35
MMP3P08254 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 AL589674.2-201ENST00000604304 337 ntBASIC6.63□□□□□ -1.35
MMP3P08254 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 AC006213.4-201ENST00000616184 634 ntBASIC6.63□□□□□ -1.35
MMP3P08254 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 RN7SL544P-201ENST00000617232 284 ntBASIC6.63□□□□□ -1.35
MMP3P08254 RN7SL763P-201ENST00000620922 284 ntBASIC6.63□□□□□ -1.35
MMP3P08254 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.63□□□□□ -1.35
MMP3P08254 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 AC022819.1-201ENST00000563495 3910 ntBASIC6.63□□□□□ -1.35
MMP3P08254 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 LINC01616-201ENST00000561816 2280 ntBASIC6.62□□□□□ -1.35
MMP3P08254 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 CR788268.1-201ENST00000603931 1809 ntBASIC6.62□□□□□ -1.35
MMP3P08254 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 RNA5SP46-201ENST00000362370 120 ntBASIC6.62□□□□□ -1.35
MMP3P08254 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.62□□□□□ -1.35
MMP3P08254 RPS4XP5-201ENST00000419038 768 ntBASIC6.62□□□□□ -1.35
MMP3P08254 AC244453.4-201ENST00000419150 388 ntBASIC6.62□□□□□ -1.35
MMP3P08254 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 RN7SL352P-201ENST00000466002 277 ntBASIC6.62□□□□□ -1.35
MMP3P08254 RN7SL629P-201ENST00000489622 285 ntBASIC6.62□□□□□ -1.35
MMP3P08254 MTND2P31-201ENST00000512602 616 ntBASIC6.62□□□□□ -1.35
MMP3P08254 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.62□□□□□ -1.35
MMP3P08254 TPM3P3-201ENST00000521343 354 ntBASIC6.62□□□□□ -1.35
MMP3P08254 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.62□□□□□ -1.35
MMP3P08254 AL391262.1-201ENST00000556558 1992 ntBASIC6.62□□□□□ -1.35
MMP3P08254 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.62□□□□□ -1.35
MMP3P08254 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MMP3P08254 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MMP3P08254 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
MMP3P08254 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MMP3P08254 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 OR3A2-201ENST00000408891 1076 ntBASIC6.61□□□□□ -1.35
MMP3P08254 RN7SKP166-201ENST00000410812 305 ntBASIC6.61□□□□□ -1.35
MMP3P08254 RN7SKP29-201ENST00000410957 272 ntBASIC6.61□□□□□ -1.35
MMP3P08254 BMS1P17-202ENST00000416720 316 ntBASIC6.61□□□□□ -1.35
MMP3P08254 BMS1P13-201ENST00000417301 885 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC244033.1-201ENST00000426826 870 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC099677.3-201ENST00000427081 395 ntBASIC6.61□□□□□ -1.35
MMP3P08254 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
MMP3P08254 NFYAP1-201ENST00000431953 972 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 AC073909.1-201ENST00000447112 999 ntBASIC6.61□□□□□ -1.35
MMP3P08254 RN7SL165P-201ENST00000477476 291 ntBASIC6.61□□□□□ -1.35
MMP3P08254 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 RN7SL466P-201ENST00000497546 295 ntBASIC6.61□□□□□ -1.35
MMP3P08254 OR52A4P-203ENST00000498233 1014 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC138866.2-201ENST00000508650 584 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 AC074087.1-201ENST00000512059 724 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AC087272.1-201ENST00000523624 533 ntBASIC6.61□□□□□ -1.35
MMP3P08254 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.61□□□□□ -1.35
MMP3P08254 MIR4505-201ENST00000582238 73 ntBASIC6.61□□□□□ -1.35
MMP3P08254 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 AC013244.1-201ENST00000604279 193 ntBASIC6.61□□□□□ -1.35
MMP3P08254 AL133406.3-201ENST00000606817 541 ntBASIC6.61□□□□□ -1.35
MMP3P08254 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MMP3P08254 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.61□□□□□ -1.35
MMP3P08254 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.61□□□□□ -1.35
MMP3P08254 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
MMP3P08254 AC087565.3-203ENST00000641018 837 ntBASIC6.61□□□□□ -1.35
MMP3P08254 OR11H2-202ENST00000641517 1085 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms