Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 MIR548F1-201ENST00000408667 84 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RNU6-757P-201ENST00000410334 100 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RNU4-74P-201ENST00000411280 161 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 VN1R54P-201ENST00000435210 1049 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 OR51B8P-201ENST00000449892 769 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 MTND2P24-201ENST00000453434 806 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 GTF2IP12-201ENST00000456547 356 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC021006.1-201ENST00000489849 553 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC106822.1-201ENST00000502647 526 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC109471.1-201ENST00000511631 612 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RNA5SP318-201ENST00000516352 92 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 TRIM51DP-201ENST00000529746 596 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC006530.1-201ENST00000555980 571 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC092325.1-201ENST00000566449 554 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SNORA59B-202ENST00000578183 701 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC005726.4-201ENST00000582858 458 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC027243.2-201ENST00000602530 724 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP004372.1-201ENST00000604842 844 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC096553.1-201ENST00000605169 829 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC090186.1-201ENST00000605991 572 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP003117.2-201ENST00000606010 545 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP001330.5-201ENST00000607176 411 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC016769.4-201ENST00000616893 535 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC009509.4-201ENST00000619202 509 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC111152.1-202ENST00000635848 339 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL121936.2-201ENST00000641935 662 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AP000766.1-201ENST00000561746 4140 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC007382.1-201ENST00000624376 2618 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AP005139.1-201ENST00000580702 1647 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 VIM2P-201ENST00000402383 1294 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC098592.2-201ENST00000413158 265 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 GTF3AP5-201ENST00000442645 697 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 IGBP1P3-201ENST00000447449 1000 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 MEF2AP1-201ENST00000454867 863 ntBASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.79□□□□□ -1
ZC3H4Q9UPT8 RN7SL70P-201ENST00000478322 302 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms