Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AMER3-201ENST00000321420 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 DEDD-201ENST00000368005 1256 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SNORD15A-201ENST00000384214 148 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 Y_RNA.565-201ENST00000384719 101 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC133644.1-201ENST00000398171 937 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 DAAM2-203ENST00000405961 829 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL358075.3-201ENST00000426289 226 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL355497.2-201ENST00000456346 880 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SNRPGP3-201ENST00000469405 227 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC083801.1-201ENST00000491689 358 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC147876.1-201ENST00000504408 322 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC026785.1-201ENST00000505520 580 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ASS1P9-201ENST00000513426 1236 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 BCRP5-201ENST00000514371 253 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU6-197P-201ENST00000516680 100 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 IGHVIII-67-3-201ENST00000517650 232 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC091163.2-201ENST00000519032 460 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AP003040.1-201ENST00000532044 1024 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC092868.1-201ENST00000557949 802 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC103810.4-201ENST00000578601 257 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 IGLJCOR18-201ENST00000584002 424 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SIGLEC21P-201ENST00000598990 1010 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC006548.2-201ENST00000605217 529 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 BX322562.1-201ENST00000617004 561 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 FO393412.1-201ENST00000619841 382 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC244250.3-201ENST00000620749 366 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 BMS1P21-201ENST00000634565 365 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC063952.1-201ENST00000637360 2666 ntTSL 3 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC00994-201ENST00000485805 2129 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 MSH3-201ENST00000265081 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL353616.1-201ENST00000436315 2860 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 TSTD2-201ENST00000341170 4320 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 NVL-216ENST00000482491 3003 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FUT2-202ENST00000425340 3111 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 NPY2R-201ENST00000329476 3626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC020604.1-201ENST00000622979 1909 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms