Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL008721.2-201ENST00000609475 3754 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 Y_RNA.184-201ENST00000363884 108 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 RNU1-39P-201ENST00000383897 165 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 SNORA32.2-201ENST00000384049 122 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RNU6-98P-201ENST00000384173 107 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RNU6-185P-201ENST00000384421 107 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RN7SKP232-201ENST00000410170 290 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RNU6-1068P-201ENST00000410958 103 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 BOLA3P4-201ENST00000418151 400 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC012354.2-201ENST00000423051 461 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 RPL12P14-201ENST00000431782 490 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RPL36AP53-201ENST00000432891 316 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 WBP1LP7-201ENST00000437905 363 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ARL2BPP10-201ENST00000446487 531 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 RPSAP64-201ENST00000451820 336 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 TMEM97P1-201ENST00000452969 451 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 SNX18P4-201ENST00000456554 838 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TUBB3P2-201ENST00000480063 232 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 RPL19P13-201ENST00000483119 583 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 BTF3P13-201ENST00000513224 490 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 GAPDHP35-201ENST00000513369 976 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 COX6B1P4-201ENST00000519826 484 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 IGLV3-7-201ENST00000522952 271 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 OR5B19P-201ENST00000531766 928 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC018630.1-201ENST00000541376 925 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC018448.2-201ENST00000548295 305 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC023310.2-201ENST00000553844 547 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 BMS1P15-201ENST00000554269 1141 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC004817.2-201ENST00000561794 651 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 CDK2AP2P1-201ENST00000617479 328 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC119619.1-201ENST00000619728 112 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AL034408.1-201ENST00000637712 664 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 HLA-B-257ENST00000640094 147 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 LINC00622-201ENST00000562811 1570 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USB1Q9BQ65 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USB1Q9BQ65 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USB1Q9BQ65 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USB1Q9BQ65 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USB1Q9BQ65 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC7.73□□□□□ -1.17
USB1Q9BQ65 AC089998.1-201ENST00000548575 3141 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms