Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 HMGB1P32-201ENST00000425971 565 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 RPS26P41-201ENST00000450370 284 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AC147055.3-201ENST00000510547 851 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AC090510.2-201ENST00000617465 629 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AL731534.1-201ENST00000434711 269 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 ELOCP28-201ENST00000590044 317 ntBASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 AC114786.1-201ENST00000512892 1415 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 AC087516.1-201ENST00000561236 2428 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 SNORA70H-201ENST00000383910 135 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 SNORA70J-201ENST00000384182 135 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 AL807761.1-201ENST00000417622 171 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CYCSP12-201ENST00000437729 300 ntBASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CFAP43Q8NDM7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.09□□□□□ -0.96
CFAP43Q8NDM7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 RNA5SP131-201ENST00000365452 119 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AL590762.4-201ENST00000425885 253 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AL445687.2-201ENST00000458156 728 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 RPL23AP40-201ENST00000487630 390 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 RPL15P21-201ENST00000495592 567 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AC093890.1-201ENST00000502554 540 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AP000550.3-201ENST00000637734 379 ntBASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC9.08□□□□□ -0.96
CFAP43Q8NDM7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
CFAP43Q8NDM7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CFAP43Q8NDM7 SRRM1P3-201ENST00000426911 2678 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms