Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GAPDHP71-201ENST00000511530 1003 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC074087.1-201ENST00000512059 724 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 RNA5SP34-201ENST00000516887 130 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC090286.3-201ENST00000573133 187 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC079414.3-201ENST00000612986 1090 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC024255.1-201ENST00000614376 102 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AL662795.2-201ENST00000624252 3706 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 AC079753.1-201ENST00000623243 3868 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 PARP4P2-201ENST00000446672 3326 ntBASIC5.96□□□□□ -1.46
LYSMD4Q5XG99 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 RNA5SP500-201ENST00000364486 119 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 NPM1P4-201ENST00000414095 812 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 NPM1P36-201ENST00000415681 835 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC127526.2-201ENST00000426436 775 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AL359091.1-201ENST00000449048 1734 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LRRC37A14P-201ENST00000452297 462 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 RN7SL610P-201ENST00000463845 291 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 RN7SL515P-201ENST00000463999 297 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SIAH1P1-201ENST00000479411 923 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC008410.1-201ENST00000483777 339 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 DUTP7-201ENST00000507982 486 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 HMGN2P36-201ENST00000529541 409 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC073916.1-201ENST00000545095 130 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC092944.2-201ENST00000605443 889 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AP005212.4-201ENST00000614206 710 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC087565.3-203ENST00000641018 837 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 AC061975.7-201ENST00000592016 2692 ntBASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LYSMD4Q5XG99 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 FO082842.1-201ENST00000423552 1370 ntBASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 AC104162.1-201ENST00000430831 2382 ntBASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 AL157831.2-201ENST00000564681 3095 ntBASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LYSMD4Q5XG99 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms