Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL162171.3-201ENST00000617439 3178 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC008432.1-201ENST00000615912 1320 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ATP5BP1-201ENST00000411980 1574 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 CDY19P-201ENST00000411668 1613 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 CDY18P-201ENST00000438294 1609 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC018688.1-201ENST00000636528 1754 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 IPPKP1-201ENST00000422501 768 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC104651.1-201ENST00000427559 735 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AL109741.2-201ENST00000455561 343 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC021006.1-201ENST00000489849 553 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 MTND2P33-201ENST00000506452 1031 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC117522.3-201ENST00000507974 584 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC046134.1-201ENST00000514454 666 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 OR6C7P-201ENST00000547875 934 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC009729.1-201ENST00000548873 1133 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 EIF5A2P1-201ENST00000564027 460 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC015688.2-201ENST00000584523 262 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AP001269.3-201ENST00000588718 329 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC112220.3-201ENST00000605502 502 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AL355333.1-201ENST00000605632 279 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC009994.1-201ENST00000606889 253 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 Z98200.1-201ENST00000607298 470 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC104260.1-201ENST00000616660 539 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 FER-210ENST00000628534 558 ntTSL 5 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 MIR1910-201ENST00000636955 80 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC087565.3-203ENST00000641018 837 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 AC092326.2-201ENST00000624772 1561 ntBASIC8.97□□□□□ -0.97
RC3H1Q5TC82 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
RC3H1Q5TC82 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
RC3H1Q5TC82 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RNY4P24-201ENST00000362735 96 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RNU4-51P-201ENST00000364206 140 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RNU6-224P-201ENST00000384055 107 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RPL7P27-201ENST00000403775 720 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RN7SKP86-201ENST00000410454 332 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms