Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ARHGAP42P5-201ENST00000548856 2936 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 APP-206ENST00000359726 3294 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 RN7SKP29-201ENST00000410957 272 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 NMD3P2-201ENST00000421815 761 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 AC012519.1-201ENST00000424588 610 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 USP9YP9-201ENST00000429406 715 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 AL450023.1-201ENST00000450868 751 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 BNIP3P22-201ENST00000593399 556 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 AC011455.2-201ENST00000599320 3336 ntBASIC5.15□□□□□ -1.58
LRRK2Q5S007 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 AL157831.2-201ENST00000564681 3095 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 MAPK10-377ENST00000642006 2752 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRK2Q5S007 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRK2Q5S007 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRRK2Q5S007 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRK2Q5S007 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRRK2Q5S007 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 CUBNP2-201ENST00000443534 1139 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 IGBP1P5-201ENST00000507524 1000 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 OR5AZ1P-201ENST00000527448 943 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 ATP5J2P6-201ENST00000565203 266 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 MIR3934-201ENST00000579806 107 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 SKA2-207ENST00000583380 583 ntTSL 5 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 MIR8080-201ENST00000622224 89 ntBASIC5.15□□□□□ -1.59
LRRK2Q5S007 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.15□□□□□ -1.59
LRRK2Q5S007 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 GTF2IP4-201ENST00000453092 2054 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 SAMM50P1-201ENST00000455403 1399 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC119674.1-204ENST00000641348 1343 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 SLC35E1P1-201ENST00000419313 864 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC068790.4-201ENST00000602474 263 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 AL118522.2-201ENST00000616045 615 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC034229.6-201ENST00000623704 224 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC010624.4-201ENST00000597606 1351 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRRK2Q5S007 NDUFA5P9-201ENST00000472609 340 ntBASIC5.14□□□□□ -1.59
LRRK2Q5S007 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.14□□□□□ -1.59
LRRK2Q5S007 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 OR4C1P-202ENST00000641065 1569 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms