Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGCS2P54868 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGCS2P54868 AC079776.5-201ENST00000641920 211 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HMGCS2P54868 AL391261.1-201ENST00000555712 1479 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGCS2P54868 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGCS2P54868 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGCS2P54868 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
HMGCS2P54868 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 AC007842.1-201ENST00000597336 2039 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 AC119674.1-213ENST00000641177 1386 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 MRE11P1-201ENST00000464884 2127 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 SRRM1P3-201ENST00000426911 2678 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 RNU6-171P-201ENST00000384354 107 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 MIR105-2-201ENST00000385083 81 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 RN7SKP166-201ENST00000410812 305 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 DPPA2P3-201ENST00000411853 655 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 AL022331.1-201ENST00000429025 477 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 CFL1P1-202ENST00000432948 411 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 SPRYD7P1-201ENST00000443861 570 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 AC005297.1-201ENST00000444765 862 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 AL157777.1-201ENST00000468100 304 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 UBA52P7-201ENST00000486088 380 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 RPL23AP40-201ENST00000487630 390 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.82□□□□□ -1.32
HMGCS2P54868 SCARNA6.1-201ENST00000516989 238 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGCS2P54868 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGCS2P54868 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.82□□□□□ -1.32
HMGCS2P54868 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.82□□□□□ -1.32
HMGCS2P54868 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGCS2P54868 MIR1269B-201ENST00000580405 75 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGCS2P54868 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGCS2P54868 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HMGCS2P54868 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 AC009948.3-201ENST00000603415 1798 ntBASIC6.82□□□□□ -1.32
HMGCS2P54868 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HMGCS2P54868 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGCS2P54868 LINC01616-201ENST00000561816 2280 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.81□□□□□ -1.32
HMGCS2P54868 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 AC235565.1-201ENST00000456962 1325 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 MARK2P4-201ENST00000503381 2380 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HMGCS2P54868 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 YES1P1-201ENST00000418510 1628 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 SNORA58B-201ENST00000364259 136 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
HMGCS2P54868 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HMGCS2P54868 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.81□□□□□ -1.32
HMGCS2P54868 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 AL627308.1-201ENST00000435693 821 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AL390119.1-201ENST00000440329 312 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AC007386.1-201ENST00000455212 582 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 SETP4-201ENST00000455717 868 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.81□□□□□ -1.32
HMGCS2P54868 ACA64.4-201ENST00000459070 127 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 BX510359.5-201ENST00000515651 304 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AP004607.6-201ENST00000525033 1202 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.81□□□□□ -1.32
HMGCS2P54868 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 AC007204.2-201ENST00000615022 616 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGCS2P54868 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 CDY5P-201ENST00000411487 1580 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 CDY9P-201ENST00000451397 1580 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGCS2P54868 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGCS2P54868 AC092725.2-201ENST00000567658 1389 ntBASIC6.81□□□□□ -1.32
HMGCS2P54868 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGCS2P54868 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms