Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC130352.1-201ENST00000602979 661 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC004805.3-201ENST00000603178 310 ntBASIC6.62□□□□□ -1.35
NEK3P51956 WBP1LP12-201ENST00000604449 331 ntBASIC6.62□□□□□ -1.35
NEK3P51956 U1.41-201ENST00000617626 165 ntBASIC6.62□□□□□ -1.35
NEK3P51956 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 AC073488.9-201ENST00000631601 754 ntBASIC6.62□□□□□ -1.35
NEK3P51956 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEK3P51956 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.61□□□□□ -1.35
NEK3P51956 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.61□□□□□ -1.35
NEK3P51956 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.61□□□□□ -1.35
NEK3P51956 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.61□□□□□ -1.35
NEK3P51956 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 RNA5SP485-201ENST00000365053 119 ntBASIC6.61□□□□□ -1.35
NEK3P51956 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 AC245036.1-201ENST00000391727 309 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AL359885.1-201ENST00000415786 903 ntBASIC6.61□□□□□ -1.35
NEK3P51956 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 AL360013.1-201ENST00000419031 858 ntBASIC6.61□□□□□ -1.35
NEK3P51956 CYCSP52-201ENST00000422857 310 ntBASIC6.61□□□□□ -1.35
NEK3P51956 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 RPSAP32-201ENST00000432681 526 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 AC009237.1-201ENST00000442127 744 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC007383.1-201ENST00000445875 636 ntBASIC6.61□□□□□ -1.35
NEK3P51956 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 CCNJP2-201ENST00000457810 1163 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC092691.2-201ENST00000461787 803 ntBASIC6.61□□□□□ -1.35
NEK3P51956 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 RPL19P11-201ENST00000495944 589 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.61□□□□□ -1.35
NEK3P51956 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.61□□□□□ -1.35
NEK3P51956 OR4A41P-201ENST00000533053 928 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC087888.1-201ENST00000550884 1254 ntBASIC6.61□□□□□ -1.35
NEK3P51956 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.61□□□□□ -1.35
NEK3P51956 RN7SL208P-201ENST00000577964 296 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.61□□□□□ -1.35
NEK3P51956 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 RPL12P48-201ENST00000605620 304 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AL359091.2-201ENST00000609303 556 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AL352984.2-202ENST00000613699 155 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC012676.3-201ENST00000614983 479 ntBASIC6.61□□□□□ -1.35
NEK3P51956 AC015660.5-201ENST00000623238 564 ntBASIC6.61□□□□□ -1.35
NEK3P51956 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.61□□□□□ -1.35
NEK3P51956 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NEK3P51956 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NEK3P51956 AC093297.3-201ENST00000607056 2517 ntBASIC6.6□□□□□ -1.35
NEK3P51956 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 AC005702.3-201ENST00000585345 1447 ntBASIC6.6□□□□□ -1.35
NEK3P51956 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NEK3P51956 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 AL050335.1-201ENST00000396909 869 ntBASIC6.6□□□□□ -1.35
NEK3P51956 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEK3P51956 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 RPL23AP18-201ENST00000416139 468 ntBASIC6.6□□□□□ -1.35
NEK3P51956 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.6□□□□□ -1.35
NEK3P51956 BX119321.1-201ENST00000428912 797 ntBASIC6.6□□□□□ -1.35
NEK3P51956 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.6□□□□□ -1.35
NEK3P51956 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.6□□□□□ -1.35
NEK3P51956 ARAFP2-201ENST00000440565 559 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AL353898.1-201ENST00000444055 238 ntBASIC6.6□□□□□ -1.35
NEK3P51956 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.6□□□□□ -1.35
NEK3P51956 RPL5P13-201ENST00000462840 709 ntBASIC6.6□□□□□ -1.35
NEK3P51956 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms