Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC008945.1-201ENST00000505144 499 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AP001804.1-201ENST00000526868 919 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC007494.1-201ENST00000562293 760 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AP005136.2-201ENST00000583253 1049 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AL592494.3-201ENST00000609485 464 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AC092574.1-201ENST00000609771 420 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 AL135999.3-201ENST00000610501 812 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 CASC19-238ENST00000641523 1558 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NKX2-2O95096 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 EIF3EP1-201ENST00000433978 1316 ntBASIC5.7□□□□□ -1.5
NKX2-2O95096 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-2O95096 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-2O95096 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
NKX2-2O95096 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 OR2AH1P-202ENST00000641232 2744 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC018717.1-201ENST00000457712 1505 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC024587.1-201ENST00000505925 2157 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NKX2-2O95096 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SKP250-201ENST00000363924 321 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AL121835.1-201ENST00000404250 354 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SKP108-201ENST00000411367 328 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 THEM7P-201ENST00000419556 672 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AL034379.1-201ENST00000423216 253 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AL691517.1-201ENST00000440833 1235 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC005017.1-201ENST00000482002 490 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 RPL12P30-201ENST00000488389 499 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SL362P-201ENST00000494228 267 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC106822.1-201ENST00000502647 526 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SKP248-201ENST00000516278 305 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 OR4V1P-201ENST00000525394 1140 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AP003033.2-201ENST00000528901 805 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 NPIPB14P-203ENST00000532298 987 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX2-2O95096 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AL078601.3-201ENST00000573303 535 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SL230P-201ENST00000580835 303 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC004890.3-201ENST00000605566 1095 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AL136370.1-201ENST00000608166 691 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 AL080312.2-201ENST00000613001 630 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 RN7SL261P-201ENST00000613441 282 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 uc_338.29-201ENST00000615099 168 ntBASIC5.69□□□□□ -1.5
NKX2-2O95096 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX2-2O95096 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-2O95096 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-2O95096 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NKX2-2O95096 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC079753.1-201ENST00000623243 3868 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NKX2-2O95096 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC107977.1-201ENST00000355745 939 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 Y_RNA.110-201ENST00000363220 99 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 MIR421-201ENST00000365696 85 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 AL035422.1-201ENST00000414193 397 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 PTCD2P2-201ENST00000415579 1095 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 RPL7AP14-201ENST00000424041 802 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 AL138787.1-202ENST00000437804 898 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AL512593.1-201ENST00000444758 779 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms