Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 FAM92A1P1-201ENST00000528023 890 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.45□□□□□ -1.06
HOXA2O43364 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.45□□□□□ -1.06
HOXA2O43364 MIR4637-201ENST00000582405 84 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 OR7E94P-202ENST00000601375 790 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC140658.6-201ENST00000603958 201 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.45□□□□□ -1.06
HOXA2O43364 AC103710.1-201ENST00000610003 901 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC006840.1-201ENST00000623069 542 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 RPL23AP61-201ENST00000623642 466 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 ABBA01000935.2-201ENST00000637477 838 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
HOXA2O43364 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC016722.3-201ENST00000568862 2463 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 TARS-202ENST00000455217 2523 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC8.44□□□□□ -1.06
HOXA2O43364 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
HOXA2O43364 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 RNU5F-6P-201ENST00000362979 116 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 RNU1-16P-201ENST00000365477 164 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AC074375.1-201ENST00000372993 192 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL513185.2-201ENST00000425543 193 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
HOXA2O43364 IGLV3-4-201ENST00000432300 244 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AL512882.1-201ENST00000436086 832 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 RN7SL58P-201ENST00000473445 294 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 DYNLL1P6-201ENST00000503440 264 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AC009646.1-201ENST00000510455 318 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 RNU6-430P-201ENST00000517078 107 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 AP001893.2-201ENST00000526949 202 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL157687.1-201ENST00000554853 619 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL049869.4-201ENST00000555669 178 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 MIR3913-1-201ENST00000577744 102 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AP001004.1-201ENST00000582468 324 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AC090241.1-201ENST00000587732 621 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC000068.3-201ENST00000607934 427 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC8.44□□□□□ -1.06
HOXA2O43364 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 AC079228.1-201ENST00000624774 1049 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL133384.2-201ENST00000623755 2954 ntBASIC8.44□□□□□ -1.06
HOXA2O43364 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
HOXA2O43364 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.44□□□□□ -1.06
HOXA2O43364 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms