Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 WFIKKN2-201ENST00000311378 3588 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PGM3-205ENST00000506587 1971 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 TRIM62-201ENST00000291416 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CCT5P1-201ENST00000502314 1618 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SNORD115-13-201ENST00000363358 82 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SNORD115-16-201ENST00000363887 82 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SNORD115-1-201ENST00000364961 82 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 MATN1-201ENST00000373765 3832 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 MIR34A-201ENST00000385130 110 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 MIR181B1-201ENST00000385240 110 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL512633.1-201ENST00000399931 655 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 HNRNPA1P19-201ENST00000405292 370 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SNRPEP6-201ENST00000407465 277 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 WDR54-202ENST00000409791 854 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC022022.1-201ENST00000430304 178 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL353689.1-201ENST00000438895 199 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 C16orf96-201ENST00000444310 3823 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 BPIFB5P-201ENST00000457066 1099 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 JPT1-208ENST00000481647 576 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 RPL30P5-201ENST00000494923 336 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC114801.3-201ENST00000510231 177 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 IGHVII-74-1-201ENST00000517572 241 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL160236.1-201ENST00000556317 195 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 C15orf59-AS1-201ENST00000562031 519 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC023827.2-201ENST00000566880 1061 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PEBP1P2-201ENST00000603980 558 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL391903.2-201ENST00000614532 247 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC008622.3-201ENST00000621170 600 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AP1S2-202ENST00000380291 3492 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CHRNA2-202ENST00000407991 4067 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ITGA6-203ENST00000409532 3544 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 AL356019.2-201ENST00000556738 3829 ntBASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 C12orf43-201ENST00000288757 4469 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-2Q9BYR7 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 KLHDC4-205ENST00000446344 4444 ntBASIC5.67□□□□□ -1.5
KRTAP3-2Q9BYR7 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms