Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM47Q96LD4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 MIR191-201ENST00000384873 92 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 MT-TR-201ENST00000387439 65 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 FAT1P1-201ENST00000406588 507 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL158050.1-201ENST00000416077 457 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 RPL23AP18-201ENST00000416139 468 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL591212.2-201ENST00000433923 257 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 ARAFP2-201ENST00000440565 559 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 RPL12P49-201ENST00000441100 121 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 TPMTP4-201ENST00000450749 678 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 TDGF1P6-201ENST00000463873 448 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 NDUFS5P2-201ENST00000484004 306 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC011352.3-201ENST00000505162 593 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 TMEM97P2-201ENST00000517841 403 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC092709.1-201ENST00000521355 1045 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AP003080.1-202ENST00000526526 915 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 FAM92A1P1-201ENST00000528023 890 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC091489.2-201ENST00000566263 604 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 RN7SL835P-201ENST00000579920 262 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL049840.6-201ENST00000604583 345 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC092960.1-201ENST00000604762 351 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AL365503.1-201ENST00000605247 905 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC015819.1-201ENST00000613588 663 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC233280.20-201ENST00000637412 416 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 SGO1P2-201ENST00000429458 1589 ntBASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM47Q96LD4 AC007012.2-201ENST00000623206 1676 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AL136298.2-201ENST00000556497 1570 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 Y_RNA.256-201ENST00000364594 104 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 RNA5SP23-201ENST00000391006 105 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 SNORD115-47-201ENST00000391226 86 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AL139806.1-201ENST00000403057 1002 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 TNPO1P1-201ENST00000423641 1138 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 VN1R35P-201ENST00000428102 693 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC000111.3-201ENST00000433478 193 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms