Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC138915.3-201ENST00000562908 1389 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 RNU5F-6P-201ENST00000362979 116 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 Y_RNA.128-201ENST00000363391 112 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL356057.3-201ENST00000402607 340 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL451061.1-201ENST00000407887 862 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 DNAJA1P6-201ENST00000437347 354 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 SNRPFP4-201ENST00000456366 242 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 RPL38P1-201ENST00000460914 211 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 RPS15AP36-201ENST00000492022 382 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 NDUFB4P2-201ENST00000509515 391 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 MTND6P2-201ENST00000512226 524 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 SCARNA11.1-201ENST00000516918 132 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC243960.4-201ENST00000600532 288 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL136363.1-201ENST00000605349 337 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC015908.5-201ENST00000623289 343 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC068880.5-201ENST00000624331 290 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 XRCC6P4-201ENST00000518193 2067 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC012513.3-201ENST00000623250 2116 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LRCH3Q96II8 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.69□□□□□ -1.02
LRCH3Q96II8 AC007012.2-201ENST00000623206 1676 ntBASIC8.69□□□□□ -1.02
LRCH3Q96II8 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms