Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 DUX4L52-201ENST00000549363 777 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AC016911.1-201ENST00000613297 452 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 AL137067.2-201ENST00000621202 131 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS33AQ96AX1 SMG1P5-202ENST00000529428 4219 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 SMG1P2-201ENST00000566127 4221 ntBASIC5.9□□□□□ -1.46
VPS33AQ96AX1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 AP001284.1-201ENST00000528393 2118 ntBASIC5.9□□□□□ -1.47
VPS33AQ96AX1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS33AQ96AX1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC087565.3-202ENST00000642085 1603 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL359091.1-201ENST00000449048 1734 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC092634.1-201ENST00000366505 199 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 RN7SKP205-201ENST00000410999 307 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 IGLV3-4-201ENST00000432300 244 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 HMGN1P32-201ENST00000441744 256 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 RN7SL369P-201ENST00000477138 299 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC012123.2-201ENST00000485809 248 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC009567.2-201ENST00000502989 349 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 IGHV4-55-201ENST00000520889 368 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC009268.1-201ENST00000561352 1203 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AL158062.1-201ENST00000619632 745 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC091059.2-201ENST00000623355 614 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC024587.1-201ENST00000505925 2157 ntBASIC5.89□□□□□ -1.47
VPS33AQ96AX1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS33AQ96AX1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC125336.1-201ENST00000508893 2827 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 CASC19-260ENST00000641828 2001 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 PEX12P1-201ENST00000400284 1048 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 DHFRP5-201ENST00000406944 564 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RNU6-564P-201ENST00000410983 104 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RN7SKP17-201ENST00000411242 351 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AL590399.2-201ENST00000427536 309 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RPL5P2-201ENST00000429598 854 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 USP24P1-201ENST00000433802 779 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms