Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PSMA6P1-201ENST00000400275 741 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AL359694.1-201ENST00000403247 604 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 PRELID1P1-201ENST00000403549 660 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 RNU6-584P-201ENST00000410350 95 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 MTCYBP12-201ENST00000440559 1134 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC023512.1-201ENST00000444513 499 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 UBBP5-201ENST00000446970 266 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC113367.2-201ENST00000505749 160 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AL390198.2-201ENST00000510553 222 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 MTCYBP19-201ENST00000517463 1124 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 FAM106CP-201ENST00000582212 507 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 SUMO2P14-201ENST00000604488 293 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 MIR6721-201ENST00000617181 87 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC010608.3-201ENST00000625048 527 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 API5P1-201ENST00000424316 1510 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 UG0898H09-202ENST00000623646 7040 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC008432.1-201ENST00000615912 1320 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 STAG3L4-201ENST00000352103 530 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RNA5SP333-201ENST00000363466 118 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RNA5SP334-201ENST00000364825 118 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 MTATP6P31-201ENST00000406985 692 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RNA5SP115-201ENST00000411160 107 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 VN1R51P-201ENST00000411675 945 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 PTP4A1P1-201ENST00000420539 515 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AL451136.1-201ENST00000435399 325 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 GTF2IP14-201ENST00000441415 586 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC144530.1-201ENST00000452862 555 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RPL26P30-201ENST00000453533 435 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TPT1P3-201ENST00000492841 512 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 GTF2IP9-201ENST00000502460 301 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TRAV31-201ENST00000502780 342 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC108120.2-201ENST00000512973 294 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TOMM20P1-201ENST00000534518 427 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC026956.1-201ENST00000558741 396 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC026826.3-201ENST00000561747 158 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CD24P2-201ENST00000565486 219 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 CTSLP2-201ENST00000580501 394 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AL359704.2-201ENST00000604335 521 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC025171.4-201ENST00000607250 1047 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC078880.5-201ENST00000617845 421 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC073342.3-201ENST00000624211 193 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 AC009452.1-201ENST00000640823 606 ntBASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms