Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL132640.3-201ENST00000630473 177 ntBASIC3.48□□□□□ -1.85
HSPG2P98160 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
HSPG2P98160 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HSPG2P98160 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HSPG2P98160 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 CDC27P1-201ENST00000445384 715 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC3.47□□□□□ -1.85
HSPG2P98160 TVP23CP2-201ENST00000571473 623 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC024255.1-201ENST00000614376 102 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HSPG2P98160 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 NLRP3P1-201ENST00000622303 1785 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HSPG2P98160 SNORA37-201ENST00000384504 129 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 MIR640-201ENST00000385086 96 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 AL359265.2-201ENST00000434367 631 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 Z92846.1-201ENST00000456203 268 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.47□□□□□ -1.85
HSPG2P98160 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 AL080317.3-201ENST00000607434 4315 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HSPG2P98160 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 MIR130A-201ENST00000385274 89 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AL049693.1-201ENST00000402760 611 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.47□□□□□ -1.85
HSPG2P98160 RPL34P20-201ENST00000442771 351 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC026402.1-201ENST00000513642 170 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC026688.1-201ENST00000520639 1168 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC024940.3-201ENST00000538551 316 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 AC004014.2-201ENST00000623718 5122 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 FRY-202ENST00000380250 10688 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 FRY-209ENST00000642040 10697 ntBASIC3.47□□□□□ -1.85
HSPG2P98160 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HSPG2P98160 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.47□□□□□ -1.85
HSPG2P98160 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC3.47□□□□□ -1.85
HSPG2P98160 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.47□□□□□ -1.85
HSPG2P98160 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms