Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PTCHD3P1-201ENST00000612350 537 ntBASIC7.31□□□□□ -1.24
PMS1P54277 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.31□□□□□ -1.24
PMS1P54277 AC009318.3-201ENST00000616916 503 ntBASIC7.31□□□□□ -1.24
PMS1P54277 AC013470.4-201ENST00000619978 986 ntBASIC7.31□□□□□ -1.24
PMS1P54277 AC105105.5-201ENST00000622635 1294 ntBASIC7.31□□□□□ -1.24
PMS1P54277 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PMS1P54277 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PMS1P54277 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.31□□□□□ -1.24
PMS1P54277 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
PMS1P54277 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 API5P1-201ENST00000424316 1510 ntBASIC7.31□□□□□ -1.24
PMS1P54277 CASC19-243ENST00000641588 1546 ntBASIC7.31□□□□□ -1.24
PMS1P54277 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.31□□□□□ -1.24
PMS1P54277 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PMS1P54277 OLMALINC-203ENST00000641087 3779 ntBASIC7.31□□□□□ -1.24
PMS1P54277 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.31□□□□□ -1.24
PMS1P54277 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 MTND5P11-201ENST00000511037 1812 ntBASIC7.3□□□□□ -1.24
PMS1P54277 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 OR5H2-201ENST00000355273 945 ntBASIC7.3□□□□□ -1.24
PMS1P54277 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PMS1P54277 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 SNORD116-1-201ENST00000384335 95 ntBASIC7.3□□□□□ -1.24
PMS1P54277 UBBP1-201ENST00000392399 473 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL078595.1-201ENST00000404458 226 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL049697.3-201ENST00000406493 982 ntBASIC7.3□□□□□ -1.24
PMS1P54277 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.3□□□□□ -1.24
PMS1P54277 RN7SKP296-201ENST00000411185 341 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL158825.1-201ENST00000414735 521 ntBASIC7.3□□□□□ -1.24
PMS1P54277 HMGB1P49-201ENST00000418882 569 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC090960.1-201ENST00000421072 306 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 RBMY2EP-202ENST00000456360 940 ntBASIC7.3□□□□□ -1.24
PMS1P54277 RBMY2HP-201ENST00000457961 720 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.3□□□□□ -1.24
PMS1P54277 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.3□□□□□ -1.24
PMS1P54277 AC093752.1-206ENST00000511823 336 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC096661.1-201ENST00000515870 822 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 HNRNPCP8-201ENST00000528764 888 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC7.3□□□□□ -1.24
PMS1P54277 OR4A40P-201ENST00000533878 948 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 AL109653.1-201ENST00000603091 248 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL356986.1-201ENST00000604085 341 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AP004372.1-201ENST00000604842 844 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC108865.2-201ENST00000606881 432 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 AC073488.9-201ENST00000631601 754 ntBASIC7.3□□□□□ -1.24
PMS1P54277 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.3□□□□□ -1.24
PMS1P54277 AL731556.1-201ENST00000394628 3711 ntBASIC7.3□□□□□ -1.24
PMS1P54277 AC105749.1-201ENST00000631338 2008 ntBASIC7.3□□□□□ -1.24
PMS1P54277 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.3□□□□□ -1.24
PMS1P54277 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.3□□□□□ -1.24
PMS1P54277 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PMS1P54277 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PMS1P54277 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PMS1P54277 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PMS1P54277 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PMS1P54277 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PMS1P54277 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.29□□□□□ -1.24
PMS1P54277 MFSD8-213ENST00000641134 1327 ntBASIC7.29□□□□□ -1.24
PMS1P54277 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms