Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RN7SKP103-201ENST00000363848 320 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC10.24□□□□□ -0.77
SMARCA4P51532 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
SMARCA4P51532 RNU6ATAC24P-201ENST00000516811 135 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC10.24□□□□□ -0.77
SMARCA4P51532 BLZF2P-201ENST00000553776 1130 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SMARCA4P51532 SAMMSON-209ENST00000641222 1100 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SMARCA4P51532 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 AC079753.1-201ENST00000623243 3868 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 AL031595.3-201ENST00000624919 14262 ntBASIC10.24□□□□□ -0.77
SMARCA4P51532 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA4P51532 AC011504.1-201ENST00000623331 4103 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA4P51532 AC008957.3-201ENST00000624112 2242 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA4P51532 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SMARCA4P51532 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA4P51532 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA4P51532 SNORA11-201ENST00000408789 128 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC10.23□□□□□ -0.77
SMARCA4P51532 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA4P51532 HMGB1P32-201ENST00000425971 565 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 PA2G4P6-201ENST00000438325 1197 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 RPS23P9-201ENST00000448848 438 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 RN7SL352P-201ENST00000466002 277 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 AC015864.1-201ENST00000496512 544 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA4P51532 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA4P51532 AC091953.3-201ENST00000623220 236 ntBASIC10.23□□□□□ -0.77
SMARCA4P51532 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC10.23□□□□□ -0.77
SMARCA4P51532 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SMARCA4P51532 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SMARCA4P51532 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC10.23□□□□□ -0.77
SMARCA4P51532 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA4P51532 DUTP5-201ENST00000406790 469 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 DSTNP5-201ENST00000427921 523 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 RPL21P133-201ENST00000443666 476 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 AL603882.1-201ENST00000463059 681 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA4P51532 MIR4646-201ENST00000580775 63 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA4P51532 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA4P51532 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA4P51532 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC10.22□□□□□ -0.77
SMARCA4P51532 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 MFSD8-216ENST00000641147 4009 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SMARCA4P51532 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SMARCA4P51532 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SMARCA4P51532 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SMARCA4P51532 RNA5SP87-201ENST00000384155 118 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA4P51532 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC10.22□□□□□ -0.77
SMARCA4P51532 CR383656.6-201ENST00000550518 394 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC10.22□□□□□ -0.77
SMARCA4P51532 FAM25E-202ENST00000608562 189 ntBASIC10.22□□□□□ -0.77
SMARCA4P51532 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC10.22□□□□□ -0.77
SMARCA4P51532 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SMARCA4P51532 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SMARCA4P51532 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
SMARCA4P51532 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 USP9YP3-201ENST00000434481 1766 ntBASIC10.21□□□□□ -0.77
SMARCA4P51532 AP003119.3-201ENST00000566747 4192 ntBASIC10.21□□□□□ -0.77
SMARCA4P51532 DPY19L2P2-203ENST00000435536 1858 ntBASIC10.21□□□□□ -0.77
SMARCA4P51532 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SMARCA4P51532 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SMARCA4P51532 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 RNVU1-6-201ENST00000364688 164 ntBASIC10.21□□□□□ -0.78
SMARCA4P51532 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
SMARCA4P51532 U3.36-201ENST00000408418 213 ntBASIC10.21□□□□□ -0.78
SMARCA4P51532 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC10.21□□□□□ -0.78
SMARCA4P51532 AC096775.1-201ENST00000437724 448 ntBASIC10.21□□□□□ -0.78
SMARCA4P51532 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC10.21□□□□□ -0.78
SMARCA4P51532 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC10.21□□□□□ -0.78
SMARCA4P51532 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC10.21□□□□□ -0.78
SMARCA4P51532 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC10.21□□□□□ -0.78
SMARCA4P51532 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.21□□□□□ -0.78
SMARCA4P51532 AC006116.3-201ENST00000592968 361 ntBASIC10.21□□□□□ -0.78
SMARCA4P51532 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms