Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC083795.1-201ENST00000491760 320 ntBASIC8.32□□□□□ -1.08
CPS1P31327 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.32□□□□□ -1.08
CPS1P31327 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.32□□□□□ -1.08
CPS1P31327 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.32□□□□□ -1.08
CPS1P31327 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.32□□□□□ -1.08
CPS1P31327 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.32□□□□□ -1.08
CPS1P31327 FO393409.1-201ENST00000399325 1372 ntBASIC8.32□□□□□ -1.08
CPS1P31327 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CPS1P31327 AL356317.1-201ENST00000396110 1436 ntBASIC8.32□□□□□ -1.08
CPS1P31327 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CPS1P31327 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.32□□□□□ -1.08
CPS1P31327 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CPS1P31327 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CPS1P31327 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CPS1P31327 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
CPS1P31327 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.31□□□□□ -1.08
CPS1P31327 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.31□□□□□ -1.08
CPS1P31327 PTCD2P2-201ENST00000415579 1095 ntBASIC8.31□□□□□ -1.08
CPS1P31327 AL133325.1-201ENST00000421090 382 ntBASIC8.31□□□□□ -1.08
CPS1P31327 AC245028.1-201ENST00000423259 256 ntBASIC8.31□□□□□ -1.08
CPS1P31327 TPT1P13-201ENST00000449760 499 ntBASIC8.31□□□□□ -1.08
CPS1P31327 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.31□□□□□ -1.08
CPS1P31327 OR4A40P-201ENST00000533878 948 ntBASIC8.31□□□□□ -1.08
CPS1P31327 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.31□□□□□ -1.08
CPS1P31327 MIR4480-201ENST00000582492 71 ntBASIC8.31□□□□□ -1.08
CPS1P31327 OR11H2-202ENST00000641517 1085 ntBASIC8.31□□□□□ -1.08
CPS1P31327 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 AC087516.1-201ENST00000561236 2428 ntBASIC8.31□□□□□ -1.08
CPS1P31327 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.31□□□□□ -1.08
CPS1P31327 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CPS1P31327 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.31□□□□□ -1.08
CPS1P31327 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CPS1P31327 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CPS1P31327 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.3□□□□□ -1.08
CPS1P31327 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CPS1P31327 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.3□□□□□ -1.08
CPS1P31327 GABARAPL3-201ENST00000412799 354 ntBASIC8.3□□□□□ -1.08
CPS1P31327 AC099677.3-201ENST00000427081 395 ntBASIC8.3□□□□□ -1.08
CPS1P31327 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.3□□□□□ -1.08
CPS1P31327 AL022237.1-201ENST00000446663 358 ntBASIC8.3□□□□□ -1.08
CPS1P31327 AC112187.1-201ENST00000455837 479 ntBASIC8.3□□□□□ -1.08
CPS1P31327 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.3□□□□□ -1.08
CPS1P31327 AC110775.1-201ENST00000513721 462 ntBASIC8.3□□□□□ -1.08
CPS1P31327 KCTD9P4-201ENST00000526766 1166 ntBASIC8.3□□□□□ -1.08
CPS1P31327 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.3□□□□□ -1.08
CPS1P31327 PPATP2-201ENST00000605635 508 ntBASIC8.3□□□□□ -1.08
CPS1P31327 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.3□□□□□ -1.08
CPS1P31327 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 TNPO1P2-201ENST00000426249 2665 ntBASIC8.3□□□□□ -1.08
CPS1P31327 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CPS1P31327 HSPA8P18-201ENST00000439846 1928 ntBASIC8.3□□□□□ -1.08
CPS1P31327 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 RNA5SP319-201ENST00000362768 119 ntBASIC8.29□□□□□ -1.08
CPS1P31327 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 RPS4XP5-201ENST00000419038 768 ntBASIC8.29□□□□□ -1.08
CPS1P31327 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.29□□□□□ -1.08
CPS1P31327 CYCSP6-201ENST00000434498 302 ntBASIC8.29□□□□□ -1.08
CPS1P31327 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.29□□□□□ -1.08
CPS1P31327 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.29□□□□□ -1.08
CPS1P31327 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CPS1P31327 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.29□□□□□ -1.08
CPS1P31327 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.29□□□□□ -1.08
CPS1P31327 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CPS1P31327 AL035419.1-201ENST00000397037 564 ntBASIC8.29□□□□□ -1.08
CPS1P31327 RN7SL165P-201ENST00000477476 291 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms