Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC022826.1-201ENST00000519383 805 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 OR7E10P-201ENST00000526420 991 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AP003396.4-201ENST00000527574 265 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC012414.2-201ENST00000559474 187 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 AL021368.3-201ENST00000607119 578 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AP005431.1-201ENST00000618479 319 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 AC026124.2-201ENST00000621847 656 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 RAD17P2-201ENST00000451754 1977 ntBASIC6.94□□□□□ -1.3
COL20A1Q9P218 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL20A1Q9P218 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL20A1Q9P218 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 RNA5SP333-201ENST00000363466 118 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 RNA5SP334-201ENST00000364825 118 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 RPS7P8-201ENST00000418311 581 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 RPL12P43-201ENST00000420608 499 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 TRIM60P16-201ENST00000444048 694 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 RPS15AP29-201ENST00000445539 400 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AL022237.1-201ENST00000446663 358 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC103563.5-201ENST00000455643 364 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 PSMA2P2-201ENST00000504319 686 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 SNORD46.2-201ENST00000516021 102 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 RNA5SP271-201ENST00000516700 88 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 LINC00557-201ENST00000563184 1279 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 MTND2P13-201ENST00000577438 1039 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC005244.1-201ENST00000582566 339 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC020916.2-201ENST00000591242 360 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC016542.1-201ENST00000608259 493 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 MIR6793-201ENST00000612376 63 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 TCL6_3.1-201ENST00000619064 137 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 AC008691.1-209ENST00000642094 814 ntBASIC6.93□□□□□ -1.3
COL20A1Q9P218 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL20A1Q9P218 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL20A1Q9P218 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL391261.1-201ENST00000555712 1479 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC092692.1-201ENST00000623625 2595 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 RNU105B-201ENST00000364478 208 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 RN7SKP78-201ENST00000364711 318 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms