Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 BNIP3P33-201ENST00000598912 569 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CKS1BP3-201ENST00000600888 237 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC027243.2-201ENST00000602530 724 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 BBIP1P1-201ENST00000602999 279 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC103792.1-201ENST00000603591 919 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AL355376.2-202ENST00000604686 241 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC068880.5-201ENST00000624331 290 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AP000842.4-201ENST00000638781 748 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC241584.2-201ENST00000637142 2090 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC245291.2-201ENST00000451224 1651 ntBASIC10.02□□□□□ -0.8
RTN4Q9NQC3 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RTN4Q9NQC3 AL358913.2-201ENST00000553881 1548 ntBASIC10.02□□□□□ -0.8
RTN4Q9NQC3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC10.02□□□□□ -0.8
RTN4Q9NQC3 EEF1A1P11-201ENST00000415278 1389 ntBASIC10.02□□□□□ -0.8
RTN4Q9NQC3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
RTN4Q9NQC3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
RTN4Q9NQC3 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
RTN4Q9NQC3 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 SNORA51.6-201ENST00000384151 125 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RNU6-952P-201ENST00000391164 108 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RPS21P8-201ENST00000413365 247 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RAD23BP1-201ENST00000421404 1227 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 MTCO2P5-201ENST00000422621 426 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RPL13AP7-201ENST00000425147 611 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC008074.1-201ENST00000441630 723 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL662791.1-201ENST00000441992 928 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 NFU1P2-201ENST00000448700 469 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC010982.1-201ENST00000450325 465 ntTSL 4 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 MTCO3P20-201ENST00000454926 688 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 PRR13P1-201ENST00000456678 408 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC023598.1-201ENST00000472521 361 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC019235.1-201ENST00000503847 207 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 OR5M14P-201ENST00000506803 618 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC018797.3-201ENST00000513388 1241 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC092435.1-201ENST00000513711 443 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 TUBBP8-201ENST00000560273 1232 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AL133457.1-201ENST00000564251 987 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 CDRT15P1-201ENST00000577632 564 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC011840.5-201ENST00000582125 771 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RNA5SP357-201ENST00000607318 119 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RNU6-87P-201ENST00000607561 108 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC139768.1-201ENST00000620274 898 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC004678.2-201ENST00000623695 1002 ntBASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 MITF-202ENST00000314589 1993 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 LPA-202ENST00000447678 1839 ntTSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC10.02□□□□□ -0.81
RTN4Q9NQC3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RTN4Q9NQC3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms