Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC023141.3-201ENST00000436698 278 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 ACA64.4-201ENST00000459070 127 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC018797.1-201ENST00000510791 255 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 RN7SKP67-201ENST00000515905 235 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 OR4A6P-201ENST00000534364 970 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 OR1E3-201ENST00000575608 948 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 CASC19-274ENST00000642018 970 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 ZNF101P1-201ENST00000435701 1720 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 PPBPP2-201ENST00000513150 1362 ntBASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC65Q8IXS2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RN7SKP171-201ENST00000364417 303 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC245096.1-201ENST00000413104 546 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 DPPA2P2-201ENST00000418220 897 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 NMD3P2-201ENST00000421815 761 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 GAPDHP75-201ENST00000433910 943 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 H3F3BP1-201ENST00000440551 403 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC093815.1-201ENST00000508637 280 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AC092332.1-201ENST00000563684 829 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 MIR3154-201ENST00000577829 84 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 MIR4502-201ENST00000580432 81 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 uc_338.26-201ENST00000612659 160 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 AL357562.1-201ENST00000624911 609 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 SSXP3-201ENST00000442971 1300 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 HSPD1P9-201ENST00000420325 1636 ntBASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC65Q8IXS2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 RPS26P38-201ENST00000414476 348 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 CLNS1AP1-201ENST00000435954 682 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AL353662.1-201ENST00000439099 327 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 EEF1B2P3-201ENST00000447718 678 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC093166.3-201ENST00000448785 303 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 SDC4P-201ENST00000453285 601 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC021006.1-201ENST00000489849 553 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC026782.2-201ENST00000510845 636 ntBASIC6.67□□□□□ -1.34
CCDC65Q8IXS2 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms