Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 RNF19BPY-201ENST00000458209 1550 ntBASIC5.86□□□□□ -1.47
TNFP01375 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TNFP01375 RNU1-150P-201ENST00000362491 162 ntBASIC5.86□□□□□ -1.47
TNFP01375 RN7SKP206-201ENST00000410823 293 ntBASIC5.86□□□□□ -1.47
TNFP01375 PTCD2P2-201ENST00000415579 1095 ntBASIC5.86□□□□□ -1.47
TNFP01375 AC007568.1-201ENST00000422912 471 ntBASIC5.86□□□□□ -1.47
TNFP01375 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFP01375 AL445928.1-201ENST00000435545 222 ntBASIC5.86□□□□□ -1.47
TNFP01375 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 AL161636.2-201ENST00000445179 927 ntBASIC5.86□□□□□ -1.47
TNFP01375 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFP01375 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.86□□□□□ -1.47
TNFP01375 AC099521.1-201ENST00000482557 334 ntBASIC5.86□□□□□ -1.47
TNFP01375 AC124945.1-201ENST00000485133 188 ntBASIC5.86□□□□□ -1.47
TNFP01375 AC023818.1-201ENST00000498379 384 ntBASIC5.86□□□□□ -1.47
TNFP01375 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.86□□□□□ -1.47
TNFP01375 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TNFP01375 AC112191.2-201ENST00000522428 333 ntBASIC5.86□□□□□ -1.47
TNFP01375 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFP01375 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 AC137695.1-201ENST00000604126 489 ntBASIC5.86□□□□□ -1.47
TNFP01375 CYCSP1-201ENST00000604815 315 ntBASIC5.86□□□□□ -1.47
TNFP01375 AL683813.2-201ENST00000605245 502 ntBASIC5.86□□□□□ -1.47
TNFP01375 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 AC126175.1-201ENST00000617041 758 ntBASIC5.86□□□□□ -1.47
TNFP01375 AC004836.1-201ENST00000623032 634 ntBASIC5.86□□□□□ -1.47
TNFP01375 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFP01375 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
TNFP01375 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TNFP01375 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.86□□□□□ -1.47
TNFP01375 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.86□□□□□ -1.47
TNFP01375 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFP01375 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFP01375 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TNFP01375 MIR323A-201ENST00000362199 86 ntBASIC5.85□□□□□ -1.47
TNFP01375 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 RN7SKP151-201ENST00000410230 316 ntBASIC5.85□□□□□ -1.47
TNFP01375 RN7SKP166-201ENST00000410812 305 ntBASIC5.85□□□□□ -1.47
TNFP01375 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.85□□□□□ -1.47
TNFP01375 RPS17P17-201ENST00000419392 409 ntBASIC5.85□□□□□ -1.47
TNFP01375 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.85□□□□□ -1.47
TNFP01375 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.85□□□□□ -1.47
TNFP01375 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.85□□□□□ -1.47
TNFP01375 BX119321.1-201ENST00000428912 797 ntBASIC5.85□□□□□ -1.47
TNFP01375 AK3P5-201ENST00000432033 519 ntBASIC5.85□□□□□ -1.47
TNFP01375 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.85□□□□□ -1.47
TNFP01375 RPS7P3-201ENST00000443360 580 ntBASIC5.85□□□□□ -1.47
TNFP01375 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFP01375 UBFD1P1-201ENST00000473259 814 ntBASIC5.85□□□□□ -1.47
TNFP01375 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.85□□□□□ -1.47
TNFP01375 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.85□□□□□ -1.47
TNFP01375 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.85□□□□□ -1.47
TNFP01375 AC091078.2-201ENST00000557145 559 ntBASIC5.85□□□□□ -1.47
TNFP01375 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.85□□□□□ -1.47
TNFP01375 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.85□□□□□ -1.47
TNFP01375 AC009831.5-201ENST00000624000 3189 ntBASIC5.85□□□□□ -1.47
TNFP01375 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TNFP01375 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.84□□□□□ -1.47
TNFP01375 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TNFP01375 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.84□□□□□ -1.47
TNFP01375 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms