Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AL355834.1-201ENST00000556602 3965 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC026523.2-201ENST00000625039 7739 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC087516.1-201ENST00000561236 2428 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC140479.2-201ENST00000421567 3130 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 PSMA6P1-201ENST00000400275 741 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AL132875.1-201ENST00000403623 949 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 RPS18P1-201ENST00000447840 458 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 SNRPCP3-201ENST00000474888 476 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 H3F3AP5-201ENST00000475267 429 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 RPL12P30-201ENST00000488389 499 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 SNORA74.1-201ENST00000516320 180 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 RNU6-964P-201ENST00000516524 69 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 RNA5SP434-201ENST00000516647 121 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AP005136.2-201ENST00000583253 1049 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC119403.2-201ENST00000590960 598 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC107993.1-201ENST00000591343 684 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC139792.1-201ENST00000607051 647 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AL353684.1-201ENST00000622677 1120 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 SNX18P12-201ENST00000624821 759 ntBASIC5.34□□□□□ -1.55
TVP23AA6NH52 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TVP23AA6NH52 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.34□□□□□ -1.55
TVP23AA6NH52 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TVP23AA6NH52 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TVP23AA6NH52 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
TVP23AA6NH52 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.34□□□□□ -1.56
TVP23AA6NH52 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.34□□□□□ -1.56
TVP23AA6NH52 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TVP23AA6NH52 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TVP23AA6NH52 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
TVP23AA6NH52 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 AC005224.3-201ENST00000584683 2140 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 NACAP7-201ENST00000407371 609 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 AL354868.1-201ENST00000417077 482 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LINC00328-2P-201ENST00000436585 219 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 AL590004.3-202ENST00000445883 451 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 SDC4P-201ENST00000453285 601 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AC099670.1-201ENST00000455141 783 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TVP23AA6NH52 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 ZNF519P4-201ENST00000514008 125 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AC097486.1-201ENST00000515331 210 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 OR56A7P-201ENST00000524865 941 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 NPIPB14P-203ENST00000532298 987 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AP000619.2-201ENST00000546014 969 ntBASIC5.33□□□□□ -1.56
TVP23AA6NH52 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.33□□□□□ -1.56
TVP23AA6NH52 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms