Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 DPPA3P2-201ENST00000553589 478 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC060780.2-201ENST00000589047 198 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC145423.1-201ENST00000605712 336 ntBASIC6.33□□□□□ -1.4
SIX2Q9NPC8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.33□□□□□ -1.4
SIX2Q9NPC8 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 MFSD8-219ENST00000641228 2559 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 RN7SKP279-201ENST00000411383 298 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LDHAP1-201ENST00000509421 992 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 RN7SKP238-201ENST00000516483 249 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC005244.1-201ENST00000582566 339 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC091167.5-201ENST00000605689 894 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AL133481.2-203ENST00000607558 139 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC108673.3-201ENST00000609183 335 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC069542.2-201ENST00000624816 216 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC000095.2-202ENST00000637415 154 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 AC119674.1-217ENST00000641942 1086 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 SYT14P1-202ENST00000600441 1448 ntBASIC6.32□□□□□ -1.4
SIX2Q9NPC8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.32□□□□□ -1.4
SIX2Q9NPC8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AF287957.1-201ENST00000607368 1595 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC011933.2-201ENST00000578539 2790 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 QRSL1P1-201ENST00000400977 1540 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 RNA5SP91-201ENST00000390902 119 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 CRIP1P1-201ENST00000427567 185 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC242426.1-201ENST00000435270 960 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC015983.1-201ENST00000441577 373 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.31□□□□□ -1.4
SIX2Q9NPC8 CST12P-201ENST00000457644 362 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 SEPT14P1-201ENST00000458703 648 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC092865.4-201ENST00000477936 615 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 AC079080.1-201ENST00000479841 822 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 PDCL3P4-201ENST00000489621 720 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 RN7SKP183-201ENST00000517169 324 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 IGLV3-30-201ENST00000524362 298 ntBASIC6.31□□□□□ -1.4
SIX2Q9NPC8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms