Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC090236.2-201ENST00000587933 1101 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 MIR132-201ENST00000591554 101 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 MIR6809-201ENST00000612189 116 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC010329.1-201ENST00000593903 8328 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 RBPJP7-201ENST00000442803 1447 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 RBPJP5-201ENST00000449433 1447 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 RN7SKP166-201ENST00000410812 305 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 DNAJA1P5-201ENST00000440278 943 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 PCNPP2-201ENST00000441651 455 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC092865.4-201ENST00000477936 615 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 RPL23AP40-201ENST00000487630 390 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC110056.1-201ENST00000525759 911 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC007066.2-202ENST00000566531 914 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AL139041.1-201ENST00000605480 610 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 uc_338.26-201ENST00000612659 160 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 MIR1910-201ENST00000636955 80 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 ZNF402P-201ENST00000404435 3100 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 AC012254.3-201ENST00000591183 2117 ntBASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
C9orf40Q8IXQ3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 RNA5SP273-201ENST00000362484 113 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 RNA5SP477-201ENST00000362639 119 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL354890.1-201ENST00000413730 346 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC066692.1-201ENST00000421721 457 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL731534.1-201ENST00000434711 269 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms