Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 AL132875.1-201ENST00000403623 949 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AL121835.1-201ENST00000404250 354 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 RNA5SP431-201ENST00000410312 120 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC007679.3-201ENST00000434035 414 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC016027.4-201ENST00000450866 277 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AC009963.3-201ENST00000458090 486 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 RN7SL168P-201ENST00000463821 279 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 RN7SL649P-201ENST00000496974 275 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 PRMT5P1-201ENST00000514351 598 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 RN7SKP35-201ENST00000517210 151 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC092266.1-201ENST00000610958 165 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AC009120.7-201ENST00000623452 780 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 AL354854.1-201ENST00000455940 1363 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 AC114876.1-201ENST00000490962 1366 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC139426.3-201ENST00000605648 2059 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
H3F3AP84243 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 SNORA77.2-201ENST00000408571 112 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 RPL6P30-201ENST00000443382 862 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 AL355032.1-201ENST00000472981 438 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 RBBP4P1-201ENST00000502424 1276 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 OR56A7P-201ENST00000524865 941 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC092681.3-201ENST00000609463 678 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.41□□□□□ -1.54
H3F3AP84243 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 AC092724.1-201ENST00000624623 3397 ntBASIC5.41□□□□□ -1.54
H3F3AP84243 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.41□□□□□ -1.54
H3F3AP84243 AC130360.2-201ENST00000533477 1556 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms