Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 RN7SKP171-201ENST00000364417 303 ntBASIC6.32□□□□□ -1.4
PER3P56645 FAM204BP-201ENST00000369171 701 ntBASIC6.32□□□□□ -1.4
PER3P56645 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PER3P56645 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PER3P56645 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PER3P56645 NPM1P37-201ENST00000403105 874 ntBASIC6.32□□□□□ -1.4
PER3P56645 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 SNORA79B-201ENST00000410557 148 ntBASIC6.32□□□□□ -1.4
PER3P56645 UBE2V1P9-201ENST00000414760 368 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 AL160175.1-201ENST00000428124 247 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC007365.2-201ENST00000428806 458 ntBASIC6.32□□□□□ -1.4
PER3P56645 AL035246.1-201ENST00000433554 1255 ntBASIC6.32□□□□□ -1.4
PER3P56645 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 SOCS5P1-201ENST00000440415 949 ntBASIC6.32□□□□□ -1.4
PER3P56645 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.32□□□□□ -1.4
PER3P56645 E2F6P3-201ENST00000441743 743 ntBASIC6.32□□□□□ -1.4
PER3P56645 RPL6P30-201ENST00000443382 862 ntBASIC6.32□□□□□ -1.4
PER3P56645 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.32□□□□□ -1.4
PER3P56645 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 AL096803.1-201ENST00000456921 1021 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.32□□□□□ -1.4
PER3P56645 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 RPL37P23-201ENST00000492641 294 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC005351.1-201ENST00000511152 786 ntBASIC6.32□□□□□ -1.4
PER3P56645 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 GLYATL1P4-201ENST00000529326 906 ntBASIC6.32□□□□□ -1.4
PER3P56645 SAA3P-201ENST00000533267 365 ntBASIC6.32□□□□□ -1.4
PER3P56645 AP000916.1-201ENST00000533869 835 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.32□□□□□ -1.4
PER3P56645 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 MIR4301-201ENST00000577203 66 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 AL365400.2-201ENST00000605604 902 ntBASIC6.32□□□□□ -1.4
PER3P56645 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.32□□□□□ -1.4
PER3P56645 AC093783.1-201ENST00000612976 329 ntBASIC6.32□□□□□ -1.4
PER3P56645 RN7SL126P-201ENST00000616400 299 ntBASIC6.32□□□□□ -1.4
PER3P56645 MIR6823-201ENST00000622118 61 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC073592.6-201ENST00000624271 415 ntBASIC6.32□□□□□ -1.4
PER3P56645 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
PER3P56645 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PER3P56645 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PER3P56645 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
PER3P56645 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PER3P56645 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PER3P56645 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
PER3P56645 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.31□□□□□ -1.4
PER3P56645 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 AL391261.1-201ENST00000555712 1479 ntBASIC6.31□□□□□ -1.4
PER3P56645 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 RNU1-5P-201ENST00000362684 144 ntBASIC6.31□□□□□ -1.4
PER3P56645 RNU1-65P-201ENST00000363919 148 ntBASIC6.31□□□□□ -1.4
PER3P56645 RNA5SP232-201ENST00000364144 119 ntBASIC6.31□□□□□ -1.4
PER3P56645 SNORA64.3-201ENST00000365647 134 ntBASIC6.31□□□□□ -1.4
PER3P56645 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PER3P56645 GSTA12P-201ENST00000402398 508 ntBASIC6.31□□□□□ -1.4
PER3P56645 RN7SKP254-201ENST00000410685 310 ntBASIC6.31□□□□□ -1.4
PER3P56645 TATDN1P1-201ENST00000414123 891 ntBASIC6.31□□□□□ -1.4
PER3P56645 HIGD1AP15-201ENST00000416198 280 ntBASIC6.31□□□□□ -1.4
PER3P56645 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.31□□□□□ -1.4
PER3P56645 AC005005.2-201ENST00000420779 380 ntBASIC6.31□□□□□ -1.4
PER3P56645 NANOGP5-201ENST00000424456 877 ntBASIC6.31□□□□□ -1.4
PER3P56645 AL139158.1-201ENST00000424719 340 ntBASIC6.31□□□□□ -1.4
PER3P56645 AC115285.1-201ENST00000424879 736 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms