Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 AP002981.1-201ENST00000517692 975 ntBASIC6.24□□□□□ -1.41
HTTP42858 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.24□□□□□ -1.41
HTTP42858 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 AC024940.3-201ENST00000538551 316 ntBASIC6.24□□□□□ -1.41
HTTP42858 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.24□□□□□ -1.41
HTTP42858 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.24□□□□□ -1.41
HTTP42858 AC005084.1-201ENST00000605160 304 ntBASIC6.24□□□□□ -1.41
HTTP42858 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HTTP42858 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
HTTP42858 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 RNA5SP91-201ENST00000390902 119 ntBASIC6.24□□□□□ -1.41
HTTP42858 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.24□□□□□ -1.41
HTTP42858 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.24□□□□□ -1.41
HTTP42858 RPL7P16-201ENST00000479738 738 ntBASIC6.24□□□□□ -1.41
HTTP42858 RN7SKP21-201ENST00000516503 220 ntBASIC6.24□□□□□ -1.41
HTTP42858 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.24□□□□□ -1.41
HTTP42858 AC091193.1-201ENST00000604640 448 ntBASIC6.24□□□□□ -1.41
HTTP42858 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.24□□□□□ -1.41
HTTP42858 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.24□□□□□ -1.41
HTTP42858 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.23□□□□□ -1.41
HTTP42858 RPS27AP7-201ENST00000422792 455 ntBASIC6.23□□□□□ -1.41
HTTP42858 RPS27AP6-201ENST00000427962 448 ntBASIC6.23□□□□□ -1.41
HTTP42858 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 CYCSP42-201ENST00000450823 238 ntBASIC6.23□□□□□ -1.41
HTTP42858 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.23□□□□□ -1.41
HTTP42858 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.23□□□□□ -1.41
HTTP42858 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 AP004607.3-201ENST00000530354 3915 ntBASIC6.23□□□□□ -1.41
HTTP42858 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.23□□□□□ -1.41
HTTP42858 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 AP001521.2-201ENST00000608772 546 ntBASIC6.23□□□□□ -1.41
HTTP42858 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.23□□□□□ -1.41
HTTP42858 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HTTP42858 RNU1-146P-201ENST00000364015 165 ntBASIC6.23□□□□□ -1.41
HTTP42858 RHOT1P3-201ENST00000436571 331 ntBASIC6.23□□□□□ -1.41
HTTP42858 RPL7P11-201ENST00000437586 658 ntBASIC6.23□□□□□ -1.41
HTTP42858 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.23□□□□□ -1.41
HTTP42858 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.23□□□□□ -1.41
HTTP42858 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.23□□□□□ -1.41
HTTP42858 AC092490.3-201ENST00000545370 572 ntBASIC6.23□□□□□ -1.41
HTTP42858 AC007494.1-201ENST00000562293 760 ntBASIC6.23□□□□□ -1.41
HTTP42858 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 ZNF733P-202ENST00000444809 1573 ntBASIC6.22□□□□□ -1.41
HTTP42858 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 RPL10P10-201ENST00000403509 664 ntBASIC6.22□□□□□ -1.41
HTTP42858 RPS4XP9-201ENST00000405151 780 ntBASIC6.22□□□□□ -1.41
HTTP42858 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.22□□□□□ -1.41
HTTP42858 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.22□□□□□ -1.41
HTTP42858 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.22□□□□□ -1.41
HTTP42858 MIR3160-1-201ENST00000577972 85 ntBASIC6.22□□□□□ -1.41
HTTP42858 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms