Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PTCD2P2-201ENST00000415579 1095 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 UBE2V1P14-201ENST00000415815 558 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FREM3P0C091 AC079922.1-201ENST00000443291 359 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 EEF1B2P6-201ENST00000445713 673 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.43□□□□□ -1.54
FREM3P0C091 RPL7L1P3-201ENST00000455249 689 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.43□□□□□ -1.54
FREM3P0C091 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.43□□□□□ -1.54
FREM3P0C091 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.43□□□□□ -1.54
FREM3P0C091 AC007956.1-201ENST00000555623 542 ntBASIC5.43□□□□□ -1.54
FREM3P0C091 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.43□□□□□ -1.54
FREM3P0C091 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.43□□□□□ -1.54
FREM3P0C091 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
FREM3P0C091 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.43□□□□□ -1.54
FREM3P0C091 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
FREM3P0C091 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
FREM3P0C091 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC116036.1-201ENST00000412199 367 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 MTND4LP17-201ENST00000414607 293 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 AC096775.1-201ENST00000437724 448 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 RNA5SP400-201ENST00000517155 111 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC090651.1-201ENST00000567865 634 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC008521.2-201ENST00000591021 259 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 FAM27E4-201ENST00000605259 342 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.42□□□□□ -1.54
FREM3P0C091 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FREM3P0C091 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 AC073342.2-201ENST00000595842 1800 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 NEPNP-201ENST00000404786 1371 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 AC114876.1-201ENST00000490962 1366 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
FREM3P0C091 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 MYL6P5-201ENST00000412707 459 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 AL035660.1-201ENST00000422041 222 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AL445466.1-201ENST00000448432 357 ntBASIC5.42□□□□□ -1.54
FREM3P0C091 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.42□□□□□ -1.54
FREM3P0C091 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.42□□□□□ -1.54
FREM3P0C091 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.42□□□□□ -1.54
FREM3P0C091 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.42□□□□□ -1.54
FREM3P0C091 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.42□□□□□ -1.54
FREM3P0C091 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.42□□□□□ -1.54
FREM3P0C091 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FREM3P0C091 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
FREM3P0C091 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.41□□□□□ -1.54
FREM3P0C091 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.41□□□□□ -1.54
FREM3P0C091 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.41□□□□□ -1.54
FREM3P0C091 OR52B3P-201ENST00000314715 928 ntBASIC5.41□□□□□ -1.54
FREM3P0C091 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.41□□□□□ -1.54
FREM3P0C091 RPS17P17-201ENST00000419392 409 ntBASIC5.41□□□□□ -1.54
FREM3P0C091 AC007562.1-201ENST00000421819 517 ntBASIC5.41□□□□□ -1.54
FREM3P0C091 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.41□□□□□ -1.54
FREM3P0C091 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms