Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PCDHA4-204ENST00000618834 10557 ntBASIC2.52□□□□□ -2.01
USH2AO75445 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 RPS4XP5-201ENST00000419038 768 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AL592293.2-201ENST00000422292 996 ntBASIC2.52□□□□□ -2.01
USH2AO75445 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 RPL32P33-201ENST00000487023 394 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC020593.1-201ENST00000507399 299 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC026726.1-201ENST00000512859 601 ntBASIC2.52□□□□□ -2.01
USH2AO75445 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 AP000769.2-201ENST00000602344 396 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC093765.1-201ENST00000603758 881 ntBASIC2.52□□□□□ -2.01
USH2AO75445 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USH2AO75445 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USH2AO75445 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC2.52□□□□□ -2.01
USH2AO75445 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 DUTP4-201ENST00000424782 475 ntBASIC2.52□□□□□ -2.01
USH2AO75445 DNAJC19P7-201ENST00000428811 344 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC010343.2-201ENST00000510162 224 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 MIR4277-201ENST00000578298 84 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC024220.1-201ENST00000603675 484 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC093799.2-201ENST00000610062 578 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AL139099.4-201ENST00000614802 114 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC090527.3-201ENST00000619041 548 ntBASIC2.52□□□□□ -2.01
USH2AO75445 HSPA8P18-201ENST00000439846 1928 ntBASIC2.52□□□□□ -2.01
USH2AO75445 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
USH2AO75445 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USH2AO75445 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 MAPK10-377ENST00000642006 2752 ntBASIC2.52□□□□□ -2.01
USH2AO75445 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USH2AO75445 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 MIR670-201ENST00000390142 98 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AL078599.1-201ENST00000402075 293 ntBASIC2.52□□□□□ -2.01
USH2AO75445 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 SDC4P-201ENST00000453285 601 ntBASIC2.52□□□□□ -2.01
USH2AO75445 MTND6P2-201ENST00000512226 524 ntBASIC2.52□□□□□ -2.01
USH2AO75445 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC2.52□□□□□ -2.01
USH2AO75445 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC2.52□□□□□ -2.01
USH2AO75445 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 AL450472.3-201ENST00000615578 367 ntBASIC2.52□□□□□ -2.01
USH2AO75445 MIR6830-201ENST00000636015 70 ntBASIC2.52□□□□□ -2.01
USH2AO75445 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USH2AO75445 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USH2AO75445 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms