Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MTCYBP22-201ENST00000603788 447 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC126175.1-201ENST00000617041 758 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AL161420.1-201ENST00000619393 264 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC073592.6-201ENST00000624271 415 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 ZNF840P-201ENST00000504759 1996 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 RNA5SP152-201ENST00000365184 110 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 Y_RNA.465-201ENST00000384293 102 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 VDAC2P1-201ENST00000399358 958 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CHMP1B2P-201ENST00000399581 597 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 DEFB108C-201ENST00000400154 252 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP188-201ENST00000410789 317 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AP000542.1-201ENST00000448473 371 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 ARL4AP1-201ENST00000503220 705 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CBX3P3-201ENST00000508108 532 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC079140.3-201ENST00000511111 550 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 SNORA81.2-201ENST00000516868 170 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AP005902.2-201ENST00000518393 307 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 GTF2IP11-201ENST00000526931 420 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC090607.2-201ENST00000560331 695 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 RN7SL230P-201ENST00000580835 303 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 PRR13P5-201ENST00000596581 442 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC010857.1-201ENST00000606398 594 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC100793.4-201ENST00000613683 429 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC010678.1-201ENST00000614118 713 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC068213.1-201ENST00000625124 226 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AL512310.3-201ENST00000547023 1335 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AL929601.4-201ENST00000613011 1341 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 AC119674.1-213ENST00000641177 1386 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 CASC19-205ENST00000641013 1411 ntBASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ZC3H4Q9UPT8 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms