Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NXF3Q9H4D5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NXF3Q9H4D5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.52□□□□□ -1.37
NXF3Q9H4D5 KARSP1-201ENST00000451871 1752 ntBASIC6.52□□□□□ -1.37
NXF3Q9H4D5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RN7SKP69-201ENST00000365390 305 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RN7SKP292-201ENST00000365522 317 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 CDY17P-201ENST00000414121 1282 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL035660.1-201ENST00000422041 222 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL391987.1-201ENST00000441025 200 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 CT45A11P-201ENST00000448043 1134 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PPIAP20-201ENST00000449839 135 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RPL23AP60-201ENST00000450011 454 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL122020.1-201ENST00000472287 459 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AC008629.2-201ENST00000503783 483 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 ZNF322P1-201ENST00000568013 1209 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AC012146.2-201ENST00000576545 416 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 MIR4301-201ENST00000577203 66 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AC119403.2-201ENST00000590960 598 ntBASIC6.51□□□□□ -1.37
NXF3Q9H4D5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NXF3Q9H4D5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 USP9YP3-201ENST00000434481 1766 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 RNA5SP500-201ENST00000364486 119 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC245060.4-201ENST00000413293 1121 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 PTCD2P2-201ENST00000415579 1095 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC007568.1-201ENST00000422912 471 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 RPS7P3-201ENST00000443360 580 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC104164.1-201ENST00000460282 590 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 PPIAP19-201ENST00000486414 492 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 TPM3P3-201ENST00000521343 354 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AC006530.1-201ENST00000555980 571 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 COX6CP7-201ENST00000597056 208 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 SHQ1P1-201ENST00000437111 1544 ntBASIC6.5□□□□□ -1.37
NXF3Q9H4D5 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NXF3Q9H4D5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 RNF19BPY-201ENST00000458209 1550 ntBASIC6.49□□□□□ -1.37
NXF3Q9H4D5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 TMSB4XP4-201ENST00000323496 618 ntBASIC6.49□□□□□ -1.37
NXF3Q9H4D5 SNORD8-201ENST00000363915 110 ntBASIC6.49□□□□□ -1.37
NXF3Q9H4D5 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 SNORA17A-201ENST00000391185 133 ntBASIC6.49□□□□□ -1.37
NXF3Q9H4D5 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.49□□□□□ -1.37
NXF3Q9H4D5 AL445928.1-201ENST00000435545 222 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms