Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC138393.1-206ENST00000540997 1886 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 WASF4P-201ENST00000444248 1494 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 CKAP2P1-201ENST00000555477 2049 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 FARSBP1-201ENST00000435808 1778 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 Y_RNA.148-201ENST00000363557 117 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 Y_RNA.158-201ENST00000363651 101 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 SNORD46-201ENST00000364043 104 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 RNU4-59P-201ENST00000364447 116 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 MIR146B-201ENST00000365699 73 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 PUDPP1-201ENST00000421058 495 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 NANOGP4-201ENST00000427230 913 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 MTCO1P54-201ENST00000430139 712 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RAB9AP5-201ENST00000437794 597 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 RPL15P1-201ENST00000439981 600 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AL831737.1-201ENST00000441288 271 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AL445686.1-201ENST00000443086 348 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 RAB9AP2-201ENST00000443911 597 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 FAM103A2P-201ENST00000444122 354 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 RPL7P52-201ENST00000449200 742 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 MED28P8-201ENST00000454831 521 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC023794.3-204ENST00000510754 236 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 RNU6-1143P-201ENST00000516125 104 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 OR4A45P-201ENST00000529954 901 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC144548.1-201ENST00000549577 324 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC136944.5-201ENST00000573021 151 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC053481.3-201ENST00000577881 843 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC087645.1-201ENST00000588528 291 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 SLC6A21P-201ENST00000599458 369 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AP001330.4-201ENST00000604350 154 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AP000238.1-201ENST00000608759 426 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 AP000356.4-201ENST00000639500 172 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC8.95□□□□□ -0.98
VARS2Q5ST30 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VARS2Q5ST30 OGFOD1P1-201ENST00000447552 1592 ntBASIC8.95□□□□□ -0.98
VARS2Q5ST30 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC092447.10-201ENST00000620607 1652 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 BRD7P2-201ENST00000466133 1944 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC008522.1-201ENST00000639479 2906 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL078621.1-201ENST00000272567 768 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 SNORD50B-201ENST00000364995 70 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 Y_RNA.574-201ENST00000384766 95 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 RNY4P36-201ENST00000391116 96 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 RPL32P23-201ENST00000397237 405 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL138807.1-201ENST00000400354 459 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 NACAP7-201ENST00000407371 609 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC004690.1-201ENST00000418216 328 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms