Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 RPS10P28-201ENST00000480396 498 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 RN7SL868P-201ENST00000485915 303 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC010486.3-201ENST00000511602 785 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AC114940.1-201ENST00000512162 1265 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 RNA5SP318-201ENST00000516352 92 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 Y_RNA.688-201ENST00000516565 95 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 IGKV2D-38-201ENST00000518423 240 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC087752.2-201ENST00000521219 281 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC125611.1-201ENST00000549563 229 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 AC004232.1-201ENST00000571388 208 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.03□□□□□ -1.44
CLRN1P58418 MIR378C-201ENST00000578683 81 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AC090241.1-201ENST00000587732 621 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 ZNF92P3-201ENST00000596594 954 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AL451086.1-201ENST00000605596 223 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 RMST_10.1-201ENST00000616309 154 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 MRPL57P3-201ENST00000619218 176 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 AP001153.1-201ENST00000641024 338 ntBASIC6.03□□□□□ -1.44
CLRN1P58418 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.03□□□□□ -1.44
CLRN1P58418 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.03□□□□□ -1.44
CLRN1P58418 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLRN1P58418 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLRN1P58418 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.02□□□□□ -1.45
CLRN1P58418 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.02□□□□□ -1.45
CLRN1P58418 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
CLRN1P58418 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLRN1P58418 RNU1-55P-201ENST00000365510 158 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 SNORD116-8-201ENST00000384365 95 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 RNA5SP35-201ENST00000391257 129 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 RPL10P10-201ENST00000403509 664 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AL117344.1-201ENST00000407196 616 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AL136100.1-201ENST00000407696 330 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 RNU2-17P-201ENST00000410290 190 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 SLC20A1P1-201ENST00000413906 956 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 USP9YP21-201ENST00000420603 432 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AC009500.1-201ENST00000420684 583 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 KATNBL1P3-201ENST00000443475 909 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 RPS7P4-201ENST00000444127 582 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 RPL10P7-201ENST00000495649 625 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 RPL21P131-201ENST00000497298 483 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 RPL7L1P7-201ENST00000509986 724 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 ZNF321P-202ENST00000550843 495 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.02□□□□□ -1.45
CLRN1P58418 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 MTCYBP28-201ENST00000566728 1132 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.02□□□□□ -1.45
CLRN1P58418 RPS27AP19-201ENST00000597285 458 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 AC091057.2-201ENST00000602594 792 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AC005252.1-201ENST00000604518 1063 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AC023206.1-201ENST00000605824 298 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 AL445647.2-201ENST00000615170 130 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 OR1N1-202ENST00000619659 939 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 AL121594.5-201ENST00000631724 573 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.02□□□□□ -1.45
CLRN1P58418 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 AP002833.3-201ENST00000625075 2265 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms